2kei_AB : 3D-footprint complex

structure name	REFINED SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1l1m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2kei_A interface=6,7,16,17,18,21,22,29,53,56,57, mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl > 2kei_B interface=7,16,17,18,21,22,29,53,56,57, mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl
interface signature	LYSYQSRHALA/YSYQSRHALA

Estimated binding specificities ?

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# IC=18.360 IC/col=1.148 n_of_columns=16

specificity:

A |   0   0   0   0  96   8   8   0   0   0   8   0  96   0  96  64
C |   0   0   0   0   0   0  80  96   0  96   8  96   0  96   0  16
G |   0  96   0   0   0  16   0   0  96   0   8   0   0   0   0   8
T |  96   0  96  96   0  72   8   0   0   0  72   0   0   0   0   8

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updated Mon Sep 9 15:23:58 2024