interface graph thumbnail
legend  pdf

structure nameCOMPLEX OF THE C-TERMINAL WRKY DOMAIN OF ATWRKY4 AND A W-BOX DNA
(PROBABLE WRKY TRANSCRIPTION FACTOR 4)
sourceARABIDOPSIS THALIANA
experimentNMR
structural superfamilyWRKY DNA-binding domain;
sequence familyWRKY DNA binding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKYQKY

Estimated binding specificities ?

readout + contactlogo
# IC=2.340 IC/col=0.390 n_of_columns=6 specificity:   
A |   7   7  24  73  24  73
C |   7   7  24   7  24   7
G |  75   7  24   7  24   7
T |   7  75  24   9  24   9
scan!

Dendrogram of similar interfaces ?

matrix format

home
updated Sun Jun 28 05:52:41 2026