interface graph thumbnail
legend  pdf

structure nameCOMPLEX OF THE C-TERMINAL WRKY DOMAIN OF ATWRKY4 AND A W-BOX DNA
(PROBABLE WRKY TRANSCRIPTION FACTOR 4)
sourceARABIDOPSIS THALIANA
experimentNMR
structural superfamilyWRKY DNA-binding domain;
sequence familyWRKY DNA binding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKYQKY

Estimated binding specificities ?

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# IC=2.250 IC/col=0.375 n_of_columns=6 specificity:   
A |   7  24   9  24  73   7
C |   7  24   7  24   9  73
G |   9  24   7  24   7   7
T |  73  24  73  24   7   9
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Dendrogram of similar interfaces ?

matrix format

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updated Thu Sep 12 16:16:58 2024