2o6m_AB : 3D-footprint complex

structure name	H98Q MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED WITH DNA
reference	Eastberg et al. Biochemistry 46 7215 2007
source	Physarum polycephalum
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2o6m_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 2o6m_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

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# IC=19.155 IC/col=1.064 n_of_columns=18

specificity:

A |   0  34   0   0   4   3   5   8   0  96  82   5  87   0  96   0   4   0
C |   0   4  96   0  91   2  85   4   0   0   4   4   4   0   0   0  34  96
G |  96  54   0   0   1   4   4   2   0   0   6  85   3  94   0  96   4   0
T |   0   4   0  96   0  87   2  82  96   0   4   2   2   2   0   0  54   0

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updated Tue Jul 29 18:23:38 2025