2o6m_AB : 3D-footprint complex

structure name	H98Q MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED WITH DNA
reference	Eastberg et al. Biochemistry 46 7215 2007
source	Physarum polycephalum
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2o6m_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 2o6m_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

readout + contact

# IC=20.513 IC/col=1.080 n_of_columns=19

specificity:

A |   2   0  24   0   0   5   2   5   4   0  96  83   2  84   0  96   0   5   0
C |   2   0   2  96   0  90   6  85   2   0   0   5   2   5   1   0   0  72  96
G |   7  96  70   0   0   0   5   6   0   0   0   3  85   5  90   0  96   1   0
T |  85   0   0   0  96   1  83   0  90  96   0   5   7   2   5   0   0  18   0

scan!

home
updated Mon Sep 9 15:44:19 2024