2o6m_AB : 3D-footprint complex

structure name	H98Q MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED WITH DNA
reference	Eastberg et al. Biochemistry 46 7215 2007
source	Physarum polycephalum
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2o6m_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 2o6m_B interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTVRLK

Estimated binding specificities ?

readout + contact

# IC=19.234 IC/col=1.069 n_of_columns=18

specificity:

A |   0  35   0   0   4   4   4   4   0  96  84   4  90   1  96   0   4   0
C |   0   4  96   0  92   2  84   4   0   0   4   4   2   0   0   0  33  96
G |  96  53   0   0   0   3   6   4   0   0   4  82   2  93   0  96   4   0
T |   0   4   0  96   0  87   2  84  96   0   4   6   2   2   0   0  55   0

scan!

home
updated Mon Jan 5 01:25:10 2026