2or1_LR : 3D-footprint complex

structure name	RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
reference	Aggarwal et al.
source	PHAGE 434
experiment	X-ray (resolution=2.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2or1_L interface=17,27,28,29,30,32,33,38,39,43, sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKTkrpRflpelasalgvsvdwllngt > 2or1_R interface=27,28,29,30,32,33,38,39, sissrvkskriqlglnqaelaqkvgtTQQSiEQlengKTkrprflpelasalgvsvdwllngt
interface signature	QTQQSEQKTR/TQQSEQKT

Estimated binding specificities ?

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# IC=12.780 IC/col=0.799 n_of_columns=16

specificity:

A |   6  89   0  96  96  24  24   0  24   6  24   8   0   0   0  89
C |   8   6  96   0   0  24  24  12  24   6  24   6   0   0   0   1
G |   6   0   0   0   0  24  24   8  24   6  24   6   0  96   0   6
T |  76   1   0   0   0  24  24  76  24  78  24  76  96   0  96   0

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updated Fri Dec 13 12:55:39 2024