2ost_AB : 3D-footprint complex

structure name	THE STRUCTURE OF A BACTERIAL HOMING ENDONUCLEASE : I-SSP6803I
reference	Bonocora et al. 'Embo 26 2432 2007
source	Synechocystis sp.
experiment	X-ray (resolution=3.10, R-factor=?)
reference complex	2ost_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ost_A interface=4,5,55,60,66,68,70,71,72,73,74,77,79,113,114,116,124,125, mgsTKlkgdiaqqaaimralkmgwgvlkplgdrlsydlvfdvegillkvqvkssWksekTgnyvvDnRrTRTNRrnIvRspyrgndfdfavayveelelfyvfpvdvfisygSEiHlvetdkrQRkprsfgyreawhlilqkgaaqke > 2ost_B interface=3,4,54,59,65,67,69,70,71,72,76,78,112,113,115,123, gsTKlkgdiaqqaaimralkmgwgvlkplgdrlsydlvfdvegillkvqvkssWksekTgnyvvDnRrTRTNrrnIvRspyrgndfdfavayveelelfyvfpvdvfisygSEiHlvetdkrQrkprsfgyreawhlilqkgaaqket
interface signature	TKWTDRTRTNRIRSEHQR/TKWTDRTRTNIRSEHQ

Estimated binding specificities ?

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# IC=22.428 IC/col=0.897 n_of_columns=25

specificity:

A |   5   3  24  24  24  24   0   0   0   0   5   6   0  85   6  96  96   0   0   0   0  96  24   8   1
C |   6   6  24  24  24  24  96   0   0   0  82   5  96   1   3   0   0  96  96  96   0   0  24  10   3
G |  82  82  24  24  24  24   0  96  96  96   3   3   0  10  15   0   0   0   0   0  96   0  24  72  92
T |   3   5  24  24  24  24   0   0   0   0   6  82   0   0  72   0   0   0   0   0   0   0  24   6   0

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updated Mon Sep 9 15:50:08 2024