2r0q_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A SERINE RECOMBINASE- DNA REGULATORY COMPLEX
reference	Rice et al. Mol.Cell 30 145 2008
source	Staphylococcus aureus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Resolvase-like;
reference complex	2r0q_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2r0q_C interface=125,138,141,142,150,181,182,183,186, miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskrrQaqgiqvakekgvYkgRPllyspnaKdpqkrviyhrvvemleegqaiskiakevniTRQtvYrikhdng > 2r0q_D interface=139,170,179,180,181,184, miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskqaqgiqvakekgvykgRpllyspnakdpqkrviyhrvvemleegqaiSkiakevniTRQtvYrikhdng
interface signature	QYRPKTRQY/RSTRQY

Estimated binding specificities ?

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# IC=12.523 IC/col=0.596 n_of_columns=21

specificity:

A |   6  74  24  24  24   1  96   0  23   1   5  24   0  96  53  24  15  24  24  24   0
C |   3   5  24  24  24   1   0  96   0  51  82  24   0   0  40  24  65  24  24  24  96
G |   3   4  24  24  24   0   0   0  72  44   3  24   0   0   3  24  11  24  24  24   0
T |  84  13  24  24  24  94   0   0   1   0   6  24  96   0   0  24   5  24  24  24   0

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updated Mon Sep 9 16:00:10 2024