2r0q_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A SERINE RECOMBINASE- DNA REGULATORY COMPLEX
reference	Rice et al. Mol.Cell 30 145 2008
source	Staphylococcus aureus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Resolvase-like;
reference complex	2r0q_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2r0q_E interface=125,138,141,142,150,181,182,183,186, miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskrrQaqgiqvakekgvYkgRPllyspnaKdpqkrviyhrvvemleegqaiskiakevniTRQtvYrikhdng > 2r0q_F interface=139,170,179,180,181,184, miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskqaqgiqvakekgvykgRpllyspnakdpqkrviyhrvvemleegqaiSkiakevniTRQtvYrikhdng
interface signature	QYRPKTRQY/RSTRQY

Estimated binding specificities ?

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# IC=16.591 IC/col=0.790 n_of_columns=21

specificity:

A |   8  77  24  24  24   0  96   0  88   6   0  15   0  96  93  24   0  78  24  75   0
C |   2   1  24  24  24   0   0  96   4  64  96  49   0   0   0  24  96   0  24   1  96
G |   0   0  24  24  24   0   0   0   2  16   0  18   0   0   1  24   0   8  24  10   0
T |  86  18  24  24  24  96   0   0   2  10   0  14  96   0   2  24   0  10  24  10   0

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updated Mon Sep 9 16:00:30 2024