2ve9_AF : 3D-footprint complex

structure name	XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA)
reference	Sherratt et al. Mol.Cell 31 498 2008
source	PSEUDOMONAS AERUGINOSA
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2ve9_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ve9_A interface=21,24,31,32, ddplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapa > 2ve9_F interface=25,32, eddplydeavrfvtesrrasisavQrklkigYnraarmieamemagvvtpmntngsreviapa
interface signature	SQYN/QY

Estimated binding specificities ?

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# IC=4.177 IC/col=0.348 n_of_columns=12

specificity:

A |   0   0  24  24  24  24  24  24  24  13   0  27
C |  82  82  24  24  24  24  24  24  24  16   0   0
G |   0   0  24  24  24  24  24  24  24  13  96  69
T |  14  14  24  24  24  24  24  24  24  54   0   0

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updated Mon Sep 9 16:04:07 2024