2vic_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ISHP608 TRANSPOSASE IN COMPLEX WITH LEFT END 26- MER DNA AND MANGANESE
reference	Ronning et al. 'Cell(Cambridge,Mass.)' 132 208 2008
source	HELICOBACTER PYLORI
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	Transposase IS200-like;
reference complex	2vih_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2vic_A interface= vlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqqnsnrpkqkekwksyvdnlqtkal > 2vic_B interface= vlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqq
interface signature	/

Estimated binding specificities ?

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# IC=8.431 IC/col=0.383 n_of_columns=22

specificity:

A |  96   0  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  16  54   0   0   0
C |   0   0  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  13  13   0   0   0
G |   0  96  24  24  24  24  24  24  24  24  24   0  24  24  24  24  24  13  16   0  96  96
T |   0   0  24  24  24  24  24  24  24  24  24  96  24  24  24  24  24  54  13  96   0   0

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updated Wed Jun 24 13:48:16 2026