structure nameCRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH THE COMPLETE RIGHT END 35-MER DNA AND MANGANESE
referenceRonning et al. 'Cell(Cambridge,Mass.)' 132 208 2008
sourceHELICOBACTER PYLORI
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyTransposase IS200-like;
reference complex2vih_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signature/

Estimated binding specificities ?

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# IC=13.000 IC/col=0.394 n_of_columns=33 specificity:   
A |  96  24  24  24  24  24  24  24   9   7  24   0  24  24   7   0  24  75   0   0   0  24  24  24  24  24  24  24  24  24  24  96  96
C |   0  24  24  24  24  24  24  24   7  73  24   0  24  24   7  96  24   7   0   0   0  24  24  24  24  24  24  24  24  24  24   0   0
G |   0  24  24  24  24  24  24  24  73   7  24   0  24  24  75   0  24   7   0  96  96  24  24  24  24  24  24  24  24  24  24   0   0
T |   0  24  24  24  24  24  24  24   7   9  24  96  24  24   7   0  24   7  96   0   0  24  24  24  24  24  24  24  24  24  24   0   0
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updated Wed Jun 24 13:48:21 2026