2w7n_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KORA BOUND TO OPERATOR DNA: INSIGHT INTO REPRESSOR COOPERATION IN RP4 GENE REGULATION
reference	Mueller et al. 'Nucleic 37 1915 2009
source	ESCHERICHIA COLI
experiment	X-ray (resolution=1.85, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2w7n_A interface=46,47,49,51,52,56, kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakk > 2w7n_B interface=45,46,48,50,51,55, krltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq
interface signature	TRASQR/TRASQR

Estimated binding specificities ?

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# IC=11.225 IC/col=0.863 n_of_columns=13

specificity:

A |   0   6  24   0  96   6   6   0  96  24  72   0  78
C |   0  12  24   0   0  12  78   0   0  24   6  96   6
G |  96   0  24   0   0  72   6   0   0  24  12   0   6
T |   0  78  24  96   0   6   6  96   0  24   6   0   6

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updated Fri Dec 13 13:12:52 2024