3a5t_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MAFG-DNA COMPLEX
reference	Motohashi et al. Mol.Cell.Biol. 29 6232 2009
source	Mus musculus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;Leucine zipper domain;
reference complex	7x5e_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3a5t_A interface=39,43,46,47,50,51, hmgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrsky > 3a5t_B interface=38,42,45,46,49,50, mgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskye
interface signature	RNYACR/RNYACR

Estimated binding specificities ?

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# IC=13.125 IC/col=1.010 n_of_columns=13

specificity:

A |  11   0  93   5  86  96   2   0   5  63   0   0  93
C |   8   0   2   5   0   0   2   0   5   8   0  96   3
G |  14  96   0  10   8   0  87   0   5  11  96   0   0
T |  63   0   1  76   2   0   5  96  81  14   0   0   0

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updated Fri Dec 13 13:22:53 2024