3a5t_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MAFG-DNA COMPLEX
reference	Motohashi et al. Mol.Cell.Biol. 29 6232 2009
source	Mus musculus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;Leucine zipper domain;
reference complex	7x5e_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3a5t_A interface=39,43,46,47,50,51, hmgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrsky > 3a5t_B interface=38,42,45,46,49,50, mgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskye
interface signature	RNYACR/RNYACR

Estimated binding specificities ?

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# IC=13.518 IC/col=1.040 n_of_columns=13

specificity:

A |  14   0  93  16  90  96   5   0   0  69   0   0  90
C |   5   0   3   5   2   0   2   0   2   2   0  96   2
G |   8  96   0  11   2   0  87   0   2  11  96   0   2
T |  69   0   0  64   2   0   2  96  92  14   0   0   2

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updated Mon Sep 9 16:15:30 2024