interface graph thumbnail
legend  pdf

structure namePRE-INSERTION BINARY COMPLEX OF DBH DNA POLYMERASE
(DNA polymerase IV)
referenceWilson et al. Mol.Cell 29 767 2008
sourceSulfolobus acidocaldarius
experimentX-ray (resolution=2.60, R-factor=0.217)
structural superfamilyDNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain;
sequence familyimpB/mucB/samB family;
redundant complexes3bq2 3bq1
reference complex4f4y_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ------------------------------------------YC--IC------RC--                      +----------3bq0_A    
                                                                                  ! 
  --VTFTAT------PC--------------------ST------------------RG                      !         +-1jx4_A    
                                                                              +---6     +---1 
  ------MASA--AAPCIC------------------------EG----TG------RG                  !   !   +-4   +-2oh2_B    
                                                                              !   !   ! ! 
  --------ITRTST------------------------------------RG------                  !   +---5 +-----4ecq_A    
                                                                              !       ! 
  YG--------------------------------------EG--RA----QA------       +----------7       !  +---3osn_A    
                                                                   !          !       +--3 
  --------------------------------------MA--------RC--ST----       !          !          +---3mfi_A    
                                                                   !          ! 
  ------EG------FG--------------------------ET--------------     --8          !          +---3gqc_A    
                                                                   !          +----------2 
  --HA----------WG------------------------------------------       !                     +---2aq4_A    
                                                                   ! 
  ------------------NGKGNGRTHGKCECNGNG----------------------       +-------------------------2kn7_A    
                                                                 

home
updated Thu Sep 12 16:55:41 2024