3c3l_B : 3D-footprint complex

structure name	X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP P2 PROMOTER COMPLEX (Virion RNA polymerase)
reference	Gleghorn et al. Mol.Cell 32 707 2008
source	Bacteriophage N4
experiment	X-ray (resolution=2.40, R-factor=?)
reference complex	3q23_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3c3l_B interface=104,257,258,259,891,894, gidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdvgkrfaqgteanrwvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntaikdakdvaaitgidqallpeglveqfdtgmtlteavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlrnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltitiygsgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlqkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagvagipfmtigtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreel
interface signature	KKKTDR

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# IC=4.229 IC/col=0.705 n_of_columns=6

A |   0  24  60   0   0  12
C |  12  24  12   0  96   0
G |  72  24  12  96   0  72
T |  12  24  12   0   0  12

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updated Thu Sep 12 16:59:37 2024