3g0r_AB : 3D-footprint complex

structure name	COMPLEX OF MTH0212 AND AN 8BP DSDNA WITH DISTORTED ENDS
reference	Dickmanns et al.
source	METHANOTHERMOBACTER THERMAUTOTROPHICUS
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	DNase I-like;
reference complex	3g00_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g0r_A interface=10,38,115,206,245, vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYrtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleiel > 3g0r_B interface=10,38,112,114,115,203,205,206,207,245, vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpNgKMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytWwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleie
interface signature	NKMYD/NKNKMWSYRD

Estimated binding specificities ?

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# IC=5.044 IC/col=0.560 n_of_columns=9

specificity:

A |   0   6  24   6  24  24   6  60   6
C |   0  78  24   6  24  24  90   6   0
G |  96   6  24  78  24  24   0  12  84
T |   0   6  24   6  24  24   0  18   6

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updated Fri Dec 13 14:49:17 2024