interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE BETA-BETA-ALPHA-ME TYPE II RESTRICTION ENDONUCLEASE HPY99I IN THE ABSENCE OF EDTA
referenceSokolowska et al.
sourceHelicobacter pylori
experimentX-ray (resolution=1.50, R-factor=?)
structural superfamilyHis-Me finger endonucleases;
reference complex3gox_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEINQTRRDTR/ENQRRDTR

Estimated binding specificities ?

readout + contactlogo
# IC=8.247 IC/col=1.031 n_of_columns=8 specificity:   
A |  12  60   0   0   0   0   0  84
C |  12  12  96   0   0  96   0   0
G |  12  12   0  96   0   0  96   0
T |  60  12   0   0  96   0   0  12
scan!

home
updated Mon Jan 5 03:51:21 2026