3h0d_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF CTSR IN COMPLEX WITH A 26BP DNA DUPLEX
reference	Fuhrmann et al. Science 324 1323 2009
source	BACILLUS STEAROTHERMOPHILUS
experiment	X-ray (resolution=2.40, R-factor=?)
reference complex	3h0d_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3h0d_A interface=27,37,39,40,42,43,61, pnisdiieqylkqvlnmsdqdiveikRseiankfrcVpSQiNYvintrftlergyiveskRggggyirimkvktkseaqlidqllelidhrisqssaedvikrlmeekvisereakmmlsvmdrsvlyidlperdelrarmlkamltslkyklei > 3h0d_B interface=26,36,38,39,41,42,60, nisdiieqylkqvlnmsdqdiveikRseiankfrcVpSQiNYvintrftlergyiveskRggggyirimkvktkseaqlidqllelidhrisqssaedvikrlmeekvisereakmmlsvmdrsvlyidlperdelrarmlkamltslkyk
interface signature	RVSQNYR/RVSQNYR

Estimated binding specificities ?

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# IC=17.206 IC/col=0.956 n_of_columns=18

specificity:

A |   2   5   0   2  96   0   0  87  24  24   1   8   2   2  93  11   1   0
C |   5   8   0   0   0  96   0   2  24  24   2  10   2   2   0  79  93   0
G |   2  13   0  94   0   0   0   2  24  24   0  11   5  92   3   2   0   0
T |  87  70  96   0   0   0  96   5  24  24  93  67  87   0   0   4   2  96

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updated Fri Dec 13 15:09:46 2024