3hos_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MARINER MOS1 PAIRED END COMPLEX WITH MG (TRANSPOSABLE ELEMENT MARINER, COMPLETE CDS)
reference	Richardson et al. 'Cell(Cambridge,Mass.)' 138 1096 2009
source	DROSOPHILA MAURITIANA
experiment	X-ray (resolution=3.50, R-factor=0.222)
structural superfamily	"Winged helix" DNA-binding domain;
sequence family	Transposase;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3hos_B interface=40,43,44,61,63,64,95,96,97,98,100, vpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvptvKtcERwfqrfksgdfdvddkeHgKPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrpeyqrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe
interface signature	KERHKPSQQAS

Estimated binding specificities ?

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# IC=16.048 IC/col=0.845 n_of_columns=19

specificity:

A |   0  96   4  96  70  24  24  83   0   0  83  24  24   0   0   4   4   4   0
C |   0   0  83   0  10  24  24   4   0   0   5  24  24   0   0   4  75   5   0
G |   0   0   4   0   8  24  24   4   0  96   4  24  24   0  96   5   8  87   0
T |  96   0   5   0   8  24  24   5  96   0   4  24  24  96   0  83   9   0  96

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updated Mon Dec 18 08:03:14 2023