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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE THAP DOMAIN FROM D. MELANOGASTER P-ELEMENT TRANSPOSASE IN COMPLEX WITH ITS NATURAL DNA BINDING SITE
(Transposable element P transposase)
referenceLyubimov et al. Nat.Struct.Mol.Biol. 17 117 2010
sourceDrosophila melanogaster
experimentX-ray (resolution=1.74, R-factor=0.179)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyTHAP domain;
reference complex6pe2_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYHNQRR

Estimated binding specificities ?

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# IC=3.968 IC/col=0.661 n_of_columns=6 specificity:   
A |   9  67  96   0  24   9
C |  11   9   0   0  24   9
G |   9   9   0  96  24  67
T |  67  11   0   0  24  11
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updated Thu Jan 8 21:55:41 2026