interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF KLENOW FRAGMENT OF TAQ POLYMERASE IN COMPLEX WITH AN ABASIC SITE
(DNA polymerase I, thermostable)
referenceDiederichs et al. 'Embo 29 1738 2010
sourceThermus aquaticus
experimentX-ray (resolution=2.25, R-factor=0.191)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNRH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  13  13   0   0
C |  13  54   0  96
G |  54  13  96   0
T |  16  16   0   0
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updated Mon Dec 18 08:25:25 2023