3mu6_AB : 3D-footprint complex

structure name	INHIBITING THE BINDING OF CLASS IIA HISTONE DEACETYLASES TO MYOCYTE ENHANCER FACTOR-2 BY SMALL MOLECULES
reference	Jayathilaka et al. 'Nucleic 40 5378 2012
source	Homo sapiens
experiment	X-ray (resolution=2.43, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mu6_A interface=2,22, gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay > 3mu6_B interface=2,22, gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay
interface signature	RK/RK

Estimated binding specificities ?

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# IC=2.944 IC/col=0.294 n_of_columns=10

specificity:

A |   7   1  56  25  20  24  24  10  74   9
C |  73  19  11  23  22  24  24  16   1   7
G |   8   2  16  21  21  24  24  14  20  64
T |   8  74  13  27  33  24  24  56   1  16

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updated Fri Dec 13 16:37:21 2024