3mu6_CD : 3D-footprint complex

structure name	INHIBITING THE BINDING OF CLASS IIA HISTONE DEACETYLASES TO MYOCYTE ENHANCER FACTOR-2 BY SMALL MOLECULES
reference	Jayathilaka et al. 'Nucleic 40 5378 2012
source	Homo sapiens
experiment	X-ray (resolution=2.43, R-factor=?)
structural superfamily	SRF-like;
reference complex	1egw_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mu6_C interface=2,22, gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay > 3mu6_D interface=2,22, gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay
interface signature	RK/RK

Estimated binding specificities ?

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# IC=5.383 IC/col=0.538 n_of_columns=10

specificity:

A |  10   0  64  24  24  24  24  10  85   0
C |  85   0  10  24  24  24  24  10   1   0
G |   0   0  12  24  24  24  24  10  10  96
T |   1  96  10  24  24  24  24  66   0   0

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updated Mon Sep 9 19:13:18 2024