interface graph thumbnail
legend  pdf

structure nameE. COLI RNA POLYMERASE ALPHA SUBUNIT C-TERMINAL DOMAIN IN COMPLEX WITH CAP AND DNA
referenceLara-Gonzalez et al.
sourceESCHERICHIA COLI
experimentX-ray (resolution=2.99, R-factor=?)
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSRER/R/R

Estimated binding specificities ?

readout + contactlogo
# IC=6.510 IC/col=0.383 n_of_columns=17 specificity:   
A |   0  19  24  24  24  24  24  24  24  24  24  24  11   0  20   0  96
C |   0   0  24  24  24  24  24  24  24  24  24  24   9   0  19   0   0
G |   0   9  24  24  24  24  24  24  24  24  24  24   9  96   9  96   0
T |  96  68  24  24  24  24  24  24  24  24  24  24  67   0  48   0   0
scan!

home
updated Fri Dec 13 16:40:20 2024