interface graph thumbnail
legend  pdf

structure nameHUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA
referenceLangelier et al. J.Biol.Chem. 286 10690 2011
sourceHomo sapiens
experimentX-ray (resolution=2.64, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex3od8_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMFV/RFVP

Estimated binding specificities ?

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# IC=3.184 IC/col=0.318 n_of_columns=10 specificity:   
A |   0  24  13  24  24  24  24  13  24   0
C |   0  24  57  24  24  24  24  13  24  96
G |  96  24  13  24  24  24  24  57  24   0
T |   0  24  13  24  24  24  24  13  24   0
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updated Tue Jul 29 22:19:30 2025