interface graph thumbnail
legend  pdf

structure nameSNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING C5 MODIFIED THYMIDIES
(DNA polymerase I, thermostable)
referenceDiederichs et al. Proc.Natl.Acad.Sci.USA 107 21327 2010
sourceThermus aquaticus
experimentX-ray (resolution=2.00, R-factor=0.179)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNQH

Estimated binding specificities ?

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# IC=3.179 IC/col=0.795 n_of_columns=4 specificity:   
A |   9   0   0   9
C |  30  86   0  78
G |  38   1  96   9
T |  19   9   0   0
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updated Thu Jan 8 22:28:28 2026