3oqo_AC : 3D-footprint complex

structure name	CCPA-HPR-SER46P-SYN CRE
reference	schumacher et al. 'Nucleic 39 2931 2011
source	BACILLUS SUBTILIS
experiment	X-ray (resolution=2.97, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3oqo_A interface=5,15,16,17,20,21,28,52,55,56, mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstka > 3oqo_C interface=5,15,16,17,20,21,28,52,55,56, mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk
interface signature	ISMASRNALA/ISMASRNALA

Estimated binding specificities ?

readout + contact

# IC=11.597 IC/col=0.773 n_of_columns=15

specificity:

A |   0   0   6  24  24  13   0   0   0   3   6  24   0  96  70
C |   0   0  13  24  24   8  96   0   7   5  17  24  96   0  10
G |   0  96   5  24  24  65   0  96   0   6  19  24   0   0  10
T |  96   0  72  24  24  10   0   0  89  82  54  24   0   0   6

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updated Fri Dec 13 16:48:42 2024