3p57_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE P300 TAZ2 DOMAIN BOUND TO MEF2 ON DNA
reference	Riquelme et al. 'Nucleic 39 4464 2011
source	HOMO SAPIENS
experiment	X-ray (resolution=2.19, R-factor=?)
structural superfamily	SRF-like;
reference complex	1c7u_A 7xuz_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3p57_C interface=2,22, gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk > 3p57_D interface=2,14,22, gRkkiqitrimdeRnrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk
interface signature	RK/RRK

Estimated binding specificities ?

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# IC=5.766 IC/col=0.577 n_of_columns=10

specificity:

A |   0   0  54  24  24  24  24  16  96   0
C |   0   0  16  24  24  24  24  13   0   0
G |   0   0  13  24  24  24  24  13   0  96
T |  96  96  13  24  24  24  24  54   0   0

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updated Mon Sep 9 19:24:19 2024