interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A MUTANT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN COMPLEX WITH A BLUNT-ENDED DNA AND DDATP
(DNA polymerase I)
referenceDiederichs et al. Chembiochem 12 1574 2011
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.166)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRH

Estimated binding specificities ?

contactlogo
# IC=2.183 IC/col=0.546 n_of_columns=4 specificity:   
A |  12   7   0   0
C |  25  64  14  39
G |  51   0  76   0
T |   8  25   6  57
scan!

home
updated Mon Dec 18 08:44:15 2023