interface graph thumbnail
legend  pdf

structure nameMUTM SLANTED COMPLEX 1
(Formamidopyrimidine-DNA glycosylase)
referenceVerdine et al. Proc.Natl.Acad.Sci.USA 109 1086 2012
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.95, R-factor=0.196)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMRFRR

Estimated binding specificities ?

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# IC=3.906 IC/col=0.781 n_of_columns=5 specificity:   
A |  69   9   0   0   9
C |   9  69  86   9   1
G |   9   9   9   1  86
T |   9   9   1  86   0
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updated Thu Sep 12 18:13:00 2024