interface graph thumbnail
legend  pdf

structure nameMUTM INTERROGATION COMPLEX 6
(DNA GLYCOSYLASE)
referenceVerdine et al. Proc.Natl.Acad.Sci.USA 109 1086 2012
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.65, R-factor=0.189)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRFR

Estimated binding specificities ?

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# IC=3.360 IC/col=0.840 n_of_columns=4 specificity:   
A |   7   0   0  19
C |  74   0   0  16
G |   8   0  96  45
T |   7  96   0  16
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updated Thu Sep 12 18:13:17 2024