3sv4_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN AN OPEN BINARY COMPLEX WITH DT AS TEMPLATING NUCLEOBASE (DNA polymerase I, thermostable)
reference	Diederichs et al. Nat.Chem.Biol. 8 612 2012
source	Thermus aquaticus
experiment	X-ray (resolution=1.99, R-factor=0.181)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A; Taq polymerase, exonuclease;
reference complex	6fbc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3sv4_A interface=248,252,281,288,291,295,323,364,365,368,372,382,451,455,485, aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmvdplmrraaKTinFgvlYgmsahrlsqElaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake
interface signature	KTRNNREKTFYENQH

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# IC=3.689 IC/col=0.738 n_of_columns=5

A |   0  22  22   7   0
C |   0  14   7  82   8
G |   0  16  59   0  88
T |  96  44   8   7   0

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updated Sun Jun 28 08:44:02 2026