| structure name | CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA (Endonuclease Bse634IR) |
| reference | Tamulaitiene et al. 'Nucleic 40 6741 2012 |
| source | Geobacillus stearothermophilus |
| experiment | X-ray (resolution=2.20, R-factor=0.232) |
| structural superfamily | Restriction endonuclease-like; |
| sequence family | Cfr10I/Bse634I restriction endonuclease; |
| redundant complexes |  3v20_B
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SNNSRR |
Estimated binding specificities ?
| contact |  |
A | 13 13 0 0 0 0 C | 16 57 96 0 0 96 G | 54 13 0 96 96 0 T | 13 13 0 0 0 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: BSE634I | ||
| GCCGGC | PubMed | 3v1z_B(8.91e-07), 3v20_B(3.54e-04) |
| ACCGGT | PubMed | 3v1z_B(1.13e-03), 3v20_B(3.54e-04) |
| G|CCGGC | PubMed | 3v1z_B(6.36e-06), 3v20_B(1.00e-03) |
Dendrogram of similar interfaces ?
matrix format----SCNG----------NG--SGRG----RG---- L +---3v1z_B +---------------------1 QGNGACKG------------RCSGRGSADCRG---- L +-2 +---3dvo_D ! ! --QC--------------------RGSGDCRG--RG L +-3 +-------------------------1fiu_B ! ! ----------YANCNAKG------------------ L --4 +--------------------------4j19_B ! --------RG----------------------KT-- L +---------------------------3hxo_A |
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updated Fri Sep 13 17:49:30 2024