legend  pdf

interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

Dendrogram of similar interfaces ?

structure name	CO-CRYSTAL STRUCTURE OF WILD TYPE RAT POLYMERASE BETA: ENZYME-DNA BINARY COMPLEX (DNA polymerase beta)
reference	Rangarajan et al. 'To ? ? ?
source	Rattus norvegicus
experiment	X-ray (resolution=2.25, R-factor=0.213)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence family	Fingers domain of DNA polymerase lamb;
redundant complexes	1huo 3uxp 1huz 3v7k 2bpf 3v72 2bpg
reference complex	8vfg_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3v7j_A interface=226, etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdrse