3wgi_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RSP IN COMPLEX WITH BETA-NAD+ AND OPERATOR DNA
reference	Guo et al. J.Struct.Biol. 188 195 2014
source	Thermoanaerobacter ethanolicus
experiment	X-ray (resolution=3.25, R-factor=?)
structural superfamily	NADP-binding Rossmann-fold domains;"Winged helix" DNA-binding domain;
reference complex	3wgi_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3wgi_C interface=42,44,45,47,48,51,59, ktivsmavirrlpryhryleellkndvkrissrelsekmgvTaSQiRQdlNnfggfgqQgygynveelynnltkilgldktyntiiigagnlgqaianytsfeksgfnlkgifdinprlfglkirdvevmdvetvedfiarnkidigilcipkdnaqytadrlvragikaiwnflpidlkvpddvilenvhlsdslftvsyrlneeelfkklkgeta > 3wgi_D interface=44,45,47,48,51,59, ktivsmavirrlpryhryleellkndvkrissrelsekmgvtaSQiRQdlNnfggfgqQgygynveelynnltkilgldktyntiiigagnlgqaianytsfeksgfnlkgifdinprlfglkirdvevmdvetvedfiarnkidigilcipkdnaqytadrlvragikaiwnflpidlkvpddvilenvhlsdslftvsyrlneeelfkklkgeta
interface signature	TSQRQNQ/SQRQNQ

Estimated binding specificities ?

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# IC=15.126 IC/col=0.840 n_of_columns=18

specificity:

A |   4   0   0   6   4  96  82  24  24  24  24   4   0  84  96   0  96  84
C |   4   0   0   4   4   0   6  24  24  24  24   4   0   4   0  96   0   4
G |   4   0  96   4   4   0   4  24  24  24  24   6   0   4   0   0   0   4
T |  84  96   0  82  84   0   4  24  24  24  24  82  96   4   0   0   0   4

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updated Mon Sep 9 20:53:51 2024