3zpl_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA
reference	Stevenson et al. 'Nucleic 41 7009 2013
source	STREPTOMYCES COELICOLOR
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3zpl_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zpl_A interface=68,69,70,72,73,94, prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr > 3zpl_B interface=68,69,70,72,73,94, prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr
interface signature	RSRSHR/RSRSHR

Estimated binding specificities ?

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# IC=12.961 IC/col=0.682 n_of_columns=19

specificity:

A |  81  88  24  12   4   0   0  88  24  24  24  24   4   0  85  90  24   8   4
C |   2   2  24   2   2   2   0   4  24  24  24  24   0  96   1   2  24  69   2
G |   8   2  24  80   2   1  96   2  24  24  24  24   2   0  10   2  24  10   2
T |   5   4  24   2  88  93   0   2  24  24  24  24  90   0   0   2  24   9  88

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updated Mon Sep 9 21:18:19 2024