3zpl_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA
reference	Stevenson et al. 'Nucleic 41 7009 2013
source	STREPTOMYCES COELICOLOR
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3zpl_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zpl_E interface=71,72,73,75,76,97, ndeprwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseadlpwlr > 3zpl_F interface=66,67,68,70,71,92, wltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpsedlpwlr
interface signature	RSRSHR/RSRSHR

Estimated binding specificities ?

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# IC=11.354 IC/col=0.568 n_of_columns=20

specificity:

A |  86  90  24  24   5   1   0  78  24  24  24  24   8   0  67  94  24  24   3   5
C |   1   5  24  24   8  28   0   5  24  24  24  24   1  96   1   1  24  24   0   1
G |   5   0  24  24   5   0  96   8  24  24  24  24   5   0  28   0  24  24   5   8
T |   4   1  24  24  78  67   0   5  24  24  24  24  82   0   0   1  24  24  88  82

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updated Wed Jul 30 00:23:36 2025