3zpl_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA
reference	Stevenson et al. 'Nucleic 41 7009 2013
source	STREPTOMYCES COELICOLOR
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zpl_E interface=71,72,73,75,76,97, ndeprwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseadlpwlr > 3zpl_F interface=66,67,68,70,71,92, wltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpsedlpwlr
interface signature	RSRSHR/RSRSHR

Estimated binding specificities ?

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# IC=11.902 IC/col=0.595 n_of_columns=20

specificity:

A |  86  78  24  24  12   0   0  87  24  24  24  24   3   0  80  96  24  24   0   4
C |   3  12  24  24   9  16   0   3  24  24  24  24   4  96   0   0  24  24   0   3
G |   4   3  24  24   5   0  96   3  24  24  24  24   3   0  16   0  24  24   4   3
T |   3   3  24  24  70  80   0   3  24  24  24  24  86   0   0   0  24  24  92  86

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updated Fri Dec 13 18:52:34 2024