interface graph thumbnail
legend  pdf

structure nameTHE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE
(NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA)
referenceMantovani et al. 'Cell(Cambridge,Mass.)' 152 132 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=3.08, R-factor=0.194)
sequence familyCCAATbinding transcription factor CBFB/N;
multimeric complexes4awl_ABC
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHRRRF

Estimated binding specificities ?

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# IC=5.300 IC/col=0.883 n_of_columns=6 specificity:   
A |  11   9  67   0   0   0
C |   9  11   9   0   0   0
G |   9  67   9   0   0  96
T |  67   9  11  96  96   0
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updated Fri Sep 13 18:03:12 2024