interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameTHE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE
(NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA)
referenceMantovani et al. 'Cell(Cambridge,Mass.)' 152 132 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=3.08, R-factor=0.194)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/; Core histone H2A/H2B/H3/H4;
multimeric complexes4awl_ABC
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --RT--                                 +8u14_G    
                      +------------------1 
  --RG--              !                  +8upf_G    
                      ! 
  --RG--            +-5                 +8txv_G    
                    ! !   +-------------3 
  --RC--            ! !   !             +7yqk_C    
                    ! +---4 
  --RARA         +--6     !              +6a5l_g    
                 !  !     +--------------2 
  HGRG--         !  !                    +8rbx_V    
               +-7  ! 
  --RA--       ! !  +------------------7e9c_F    
             --8 ! 
  --RC--       ! +---------------------7ux9_E    
               ! 
  --RT--       +----------------------6px1_A

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updated Sat Jan 10 06:52:26 2026