4cej_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ADDAB-DNA-ADPNP COMPLEX AT 3 ANGSTROM RESOLUTION
reference	Krajewski et al. Nature 508 416 2014
experiment	X-ray (resolution=3.00, R-factor=0.205)
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
multimeric complexes	3u44_AB 3u4q_AB 4ceh_AB 4cei_AB 4cej_AB
reference complex	3u4q_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cej_B interface=39,40,41,43,44,45,47,63,69,72,124,131,207,210,214,348,368,370,586,594,643,1056, gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvPDQmTFLmEyelaktpdmggmiraQvfsfsRlaWrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqveRmltefkRyclepedirrmaesgtayrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgFyqFtpqEfrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarQpedykdmvkevfadyeipyFiDgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvFvgnmdlsRmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggreRlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslrsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikke
interface signature	PDQTFLEQRWRRFFEQFDFRRR

Estimated binding specificities ?

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# IC=9.378 IC/col=1.172 n_of_columns=8

specificity:

A |   0   0  96   0   0   0   0  19
C |   0   0   0   0  96   0   0  20
G |   0   0   0  96   0  96  96  19
T |  96  96   0   0   0   0   0  38

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updated Fri Jan 9 00:00:53 2026