interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(AMINOPENTINYL)- DTTP
(DNA polymerase I, thermostable)
referenceDiederichs et al. J.Am.Chem.Soc. 134 11840 2012
sourceThermus aquaticus
experimentX-ray (resolution=1.90, R-factor=0.181)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNH

Estimated binding specificities ?

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# IC=2.767 IC/col=0.692 n_of_columns=4 specificity:   
A |   0   9   0   9
C |  20  67   0  67
G |  67   9  96   9
T |   9  11   0  11
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updated Thu Sep 12 18:58:02 2024