interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN TERNARY COMPLEX WITH 5-(AMINOPENTINYL)-2-DCTP
(DNA polymerase I, thermostable)
referenceDiederichs et al. J.Am.Chem.Soc. 134 11840 2012
sourceThermus aquaticus
experimentX-ray (resolution=1.89, R-factor=0.188)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNQH

Estimated binding specificities ?

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# IC=2.332 IC/col=0.583 n_of_columns=4 specificity:   
A |  22   7   0   0
C |   8  59   7  23
G |  59   8  82   0
T |   7  22   7  73
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updated Mon Dec 18 09:57:42 2023