interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQAUTICUS IN A TERNARY COMPLEX WITH 7-(AMINOPENTINYL)-7- DEAZA-DGTP
(DNA polymerase I, thermostable)
referenceDiederichs et al. J.Am.Chem.Soc. 134 11840 2012
sourceThermus aquaticus
experimentX-ray (resolution=2.00, R-factor=0.187)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNH

Estimated binding specificities ?

contactlogo
# IC=2.095 IC/col=0.524 n_of_columns=4 specificity:   
A |  42  12  24   6
C |   0  78   6  54
G |  54   6  60  24
T |   0   0   6  12
scan!

home
updated Mon Dec 18 09:57:52 2023