legend  pdf

interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

home
updated Mon Dec 18 09:59:24 2023

structure name	TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOFLUOROMETHYLENE TRIPHOSPHATE: NON-INTERACTIVE BINDING OF S-ISOMER (DNA polymerase beta)
reference	J.Am.Chem.Soc. 134 8734 2012 C11 H17 F N5 O12 P3
source	Homo sapiens
experiment	X-ray (resolution=2.05, R-factor=0.195)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence family	Fingers domain of DNA polymerase lamb;
reference complex	4kli_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4doa_A interface=25,26,29, tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse