interface graph thumbnail
legend  pdf

structure nameSNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING MODIFIED PYRIMIDINES
(DNA polymerase I, thermostable)
referenceDiederichs et al. 'Chem.Commun.(Camb.)' 48 8320 2012
sourceThermus aquaticus
experimentX-ray (resolution=2.20, R-factor=0.163)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRH

Estimated binding specificities ?

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# IC=2.714 IC/col=0.678 n_of_columns=4 specificity:   
A |   9   0   9   9
C |  11  96   9  69
G |  67   0  69   9
T |   9   0   9   9
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updated Mon Dec 18 10:11:16 2023