interface graph thumbnail
legend  pdf

structure nameSNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING MODIFIED PYRIMIDINES
(DNA polymerase I, thermostable)
referenceDiederichs et al. 'Chem.Commun.(Camb.)' 48 8320 2012
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.157)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  13  13   0   0
C |  13  54   0  96
G |  54  13  96   0
T |  16  16   0   0
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updated Sat Aug 2 06:13:22 2025