4fzy_AB : 3D-footprint complex

structure name	EXONUCLEASE X IN COMPLEX WITH 12BP BLUNT-ENDED DSDNA
reference	Cheng et al. 'Nucleic 41 7556 2013
source	Escherichia coli
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	4fzx_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4fzy_A interface=12,46,50,81,84, mlriidtetcgLqggiveiasvdvidgkivnpmshlvrpdrpispQamaIhriteamvadkpwiedviphyygsewyvahNasFdrrvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditgr > 4fzy_B interface=12,13,81,84,87, mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg
interface signature	LQINF/LQNFR

Estimated binding specificities ?

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# IC=4.242 IC/col=0.386 n_of_columns=11

specificity:

A |   0   0  24  24  24  24  24  24  24  56   0
C |  96   0  24  24  24  24  24  24  24  13  96
G |   0   0  24  24  24  24  24  24  24  13   0
T |   0  96  24  24  24  24  24  24  24  14   0

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updated Mon Sep 9 21:53:35 2024