interface graph thumbnail
legend  pdf

structure nameC.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE
referenceMartin et al.
sourceEnterobacter sp.
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilylambda repressor-like DNA-binding domains;
reference complex3s8q_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEDRTYSRR/DRTYSRR

Estimated binding specificities ?

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# IC=11.264 IC/col=0.704 n_of_columns=16 specificity:   
A |   0   0  16   6  96   0  24  24  24  24  24  16   6   0   0   0
C |   0   0  13   0   0  96  24  24  24  24  24   6  13  96  96   0
G |   0  96  13  90   0   0  24  24  24  24  24  54  16   0   0  96
T |  96   0  54   0   0   0  24  24  24  24  24  20  61   0   0   0
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updated Wed Jun 24 21:12:00 2026