4ix7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE INSV-BEN DOMAIN COMPLEXED TO ITS DNA TARGET SITE
reference	Serganov et al. 'Genes 27 602 2013
source	DROSOPHILA MELANOGASTER
experiment	X-ray (resolution=1.58, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ix7_A interface=32,54,55,56,57,96,97,100,101,104,105, dnvmvsigpnntcvpasvfeninwsvcslatRkllvtifdretlathsvtgkpSPAFkdqdkplkrmldpgkiqdiifavthkcnasekevrnaiTTkcADenKMmkiqnvkrr > 4ix7_B interface=32,54,55,56,57,93,96,97,100,101,104,105, dnvmvsigpnntcvpasvfeninwsvcslatRkllvtifdretlathsvtgkpSPAFkdqdkplkrmldpgkiqdiifavthkcnasekevrNaiTTkcADenKMmkiqnvkrr
interface signature	RSPAFTTADKM/RSPAFNTTADKM

Estimated binding specificities ?

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# IC=11.137 IC/col=1.114 n_of_columns=10

specificity:

A |  13   0   0  96  96   0   0   0   0  54
C |  13  96  96   0   0   0   0   0   0  16
G |  13   0   0   0   0   0   0  96  96  13
T |  57   0   0   0   0  96  96   0   0  13

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updated Fri Dec 13 20:00:58 2024