4jqd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX
reference	Shevtsov et al. 'Acta 71 398 2015
source	Citrobacter sp. RFL231
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4jcy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4jqd_A interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir > 4jqd_B interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir
interface signature	SSARNQH/SSARNQH

Estimated binding specificities ?

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# IC=11.362 IC/col=0.757 n_of_columns=15

specificity:

A |   0   9  96  96   3  12  24  24  24  12   6   0   0  93   0
C |  87   9   0   0   9  12  24  24  24  63  69   0   0   3   0
G |   0   3   0   0  75   9  24  24  24  12   9   0   0   0  96
T |   9  75   0   0   9  63  24  24  24   9  12  96  96   0   0

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updated Wed Jun 24 21:39:04 2026