4jqd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX
reference	Shevtsov et al. 'Acta 71 398 2015
source	Citrobacter sp. RFL231
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4jcy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4jqd_A interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir > 4jqd_B interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir
interface signature	SSARNQH/SSARNQH

Estimated binding specificities ?

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# IC=11.408 IC/col=0.761 n_of_columns=15

specificity:

A |   0   0  96  96   5  16  24  24  24  59   7   0   0  63   3
C |  96   0   0   0   7  11  24  24  24  14  77   0   0  11   0
G |   0   0   0   0  77  55  24  24  24  14   7   0   0  11  93
T |   0  96   0   0   7  14  24  24  24   9   5  96  96  11   0

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updated Mon Sep 9 22:43:12 2024