4jqd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX
reference	Shevtsov et al. 'Acta 71 398 2015
source	Citrobacter sp. RFL231
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4jcy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4jqd_A interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir > 4jqd_B interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir
interface signature	SSARNQH/SSARNQH

Estimated binding specificities ?

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# IC=11.245 IC/col=0.750 n_of_columns=15

specificity:

A |   0   9  96  96   3   9  24  24  24  15   6   0   0  93   0
C |  89  12   0   0  12   9  24  24  24  59  69   0   0   3   0
G |   1   3   0   0  72  13  24  24  24  13   9   0   0   0  96
T |   6  72   0   0   9  65  24  24  24   9  12  96  96   0   0

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updated Mon Jan 5 10:00:10 2026