4jqd_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX
reference	Shevtsov et al. 'Acta 71 398 2015
source	Citrobacter sp. RFL231
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4jcy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4jqd_E interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyirkka > 4jqd_F interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyi
interface signature	SSARNQH/SSARNQH

Estimated binding specificities ?

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# IC=10.201 IC/col=0.680 n_of_columns=15

specificity:

A |   0   0  96  18   5  11  24  24  24  24   0   0   7  71   7
C |  96   0   0   3  11  12  24  24  24  24  96   0  11  11   0
G |   0   0   0  70  73  14  24  24  24  24   0   0   8   7  89
T |   0  96   0   5   7  59  24  24  24  24   0  96  70   7   0

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updated Wed Jul 30 01:54:19 2025