4jqd_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX
reference	Shevtsov et al. 'Acta 71 398 2015
source	Citrobacter sp. RFL231
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4jcy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4jqd_E interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyirkka > 4jqd_F interface=30,32,33,34,36,37,43, mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyi
interface signature	SSARNQH/SSARNQH

Estimated binding specificities ?

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# IC=10.447 IC/col=0.696 n_of_columns=15

specificity:

A |   0   8  72  96   0  24  24  24  24  60   8   4   0  96   0
C |  88   8   8   0   0  24  24  24  24  12  76  72   0   0   0
G |   0   8   8   0  96  24  24  24  24  16   8   0   0   0  96
T |   8  72   8   0   0  24  24  24  24   8   4  20  96   0   0

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updated Wed Jun 24 21:38:47 2026